EnhancerDB
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  3. rs2474306[chr1:27778553]
Enhancers that have rs2474306[chr1:27778553]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27742945 27784244 enh174
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2474306[chr1:27778553]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27778547 27778557 ALX3 JASPAR yes 27696051
chr1 27778547 27778561 STAT1 JASPAR yes 27696052
chr1 27778547 27778562 STAT2 JASPAR yes 27696053
chr1 27778551 27778556 MYB TRANSFAC yes 27696054
Genes associated with rs2474306[chr1:27778553], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More