EnhancerDB
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  3. rs2478769[chr1:117426442]
Enhancers that have rs2478769[chr1:117426442]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117411045 117431652 enh12190
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Brain (SK-N-SH) Thyroid Neural Stem Cells (H9) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung
Transcript factors that have rs2478769[chr1:117426442]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117425152 117428810 ZNF274 GTRD no Bone Marrow (K562) 21334101
chr1 117426233 117426656 ZNF274 GTRD no Bone Marrow (K562) 21334103
chr1 117426431 117426442 HOXA10 JASPAR yes 31848746
chr1 117426432 117426442 HOXA13 JASPAR yes 31848748
chr1 117426432 117426442 HOXB13 JASPAR yes 31848749
chr1 117426432 117426442 HOXC10 JASPAR yes 31848750
chr1 117426432 117426442 HOXD13 JASPAR yes 31848751
Genes associated with rs2478769[chr1:117426442], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More