EnhancerDB
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  3. rs2488213[chr1:234886952]
Enhancers that have rs2488213[chr1:234886952]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234877045 234913055 enh12796
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs2488213[chr1:234886952]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234885996 234887496 ZNF274 GTRD no Bone Marrow (K562) 21397528
chr1 234885996 234887496 ZNF274 GTRD no Bone Marrow (K562) 107881689
chr1 234886044 234887432 TEF1 GTRD no Bone (Osteoblast) 21397529
chr1 234886044 234887432 TEF1 GTRD no Bone (Osteoblast) 107881690
chr1 234886318 234887038 ZNF274 GTRD no Bone Marrow (K562) 21397530
chr1 234886331 234887505 ZNF274 GTRD no Bone Marrow (K562) 21397531
chr1 234886331 234887505 ZNF274 GTRD no Bone Marrow (K562) 107881691
chr1 234886351 234887059 ZNF274 GTRD no Bone Marrow (K562) 21397532
chr1 234886362 234887263 P63 GTRD no Skin (Keratinocyte) 21397533
chr1 234886362 234887263 P63 GTRD no Skin (Keratinocyte) 107881692
chr1 234886363 234887315 P63 GTRD no Skin (Keratinocyte) 21397534
chr1 234886363 234887315 P63 GTRD no Skin (Keratinocyte) 107881693
chr1 234886388 234887354 P63 GTRD no Skin (Keratinocyte) 21397535
chr1 234886388 234887354 P63 GTRD no Skin (Keratinocyte) 107881694
chr1 234886412 234887375 ZNF274 GTRD no Blood (GM12878) 107881695
chr1 234886541 234887226 P63 GTRD no Skin (Keratinocyte) 21397540
chr1 234886541 234887226 P63 GTRD no Skin (Keratinocyte) 107881696
chr1 234886577 234886963 ZNF274 GTRD no Liver (HepG2) 21397541
chr1 234886583 234887553 ZNF274 GTRD no Blood (GM12878) 107881697
chr1 234886832 234887102 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21397542
chr1 234886832 234887102 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107881698
chr1 234886857 234887257 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21397543
chr1 234886857 234887257 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107881699
chr1 234886871 234887227 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21397544
chr1 234886871 234887227 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107881700
chr1 234886871 234887251 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21397545
chr1 234886871 234887251 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107881701
chr1 234886871 234887415 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21397546
chr1 234886871 234887415 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107881702
chr1 234886882 234887338 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21397547
chr1 234886882 234887338 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107881703
chr1 234886886 234887226 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21397548
chr1 234886886 234887226 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107881704
chr1 234886902 234887192 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21397549
chr1 234886902 234887192 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107881705
chr1 234886905 234887129 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21397550
chr1 234886905 234887129 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107881706
chr1 234886909 234887318 EP300 UCSC Txn Factor no Conserved 107881707
chr1 234886913 234887223 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21397551
chr1 234886913 234887223 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107881708
chr1 234886913 234887249 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21397552
chr1 234886913 234887249 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107881709
chr1 234886919 234887229 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21397553
chr1 234886919 234887229 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107881710
chr1 234886928 234887318 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21397554
chr1 234886928 234887318 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107881711
chr1 234886933 234887373 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21397555
chr1 234886933 234887373 TEAD4 UCSC Txn Factor no Conserved 107881712
chr1 234886933 234887373 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107881713
chr1 234886936 234887240 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21397556
chr1 234886936 234887240 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107881714
chr1 234886952 234886962 SP1 JASPAR yes 36311209
Genes associated with rs2488213[chr1:234886952], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More