EnhancerDB
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  3. rs2494280[chr1:203256255]
Enhancers that have rs2494280[chr1:203256255]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203242209 203262675 enh881
Bone Marrow (K562) Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2494280[chr1:203256255]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203256025 203256352 ZNF143 GTRD no Epithelial (MCF-7) 21367807
chr1 203256046 203256446 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21367808
chr1 203256194 203256694 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21367809
chr1 203256224 203256760 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21367810
chr1 203256249 203256813 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21367811
chr1 203256250 203256263 HSF4 JASPAR yes 34613838
chr1 203256254 203256269 NR2C2 JASPAR yes 34613839
Genes associated with rs2494280[chr1:203256255], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More