EnhancerDB
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  3. rs2506879[chr1:10566668]
Enhancers that have rs2506879[chr1:10566668]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 10562245 10593475 enh59
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs2506879[chr1:10566668]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 10566648 10566669 IRF1 JASPAR yes 26718622
chr1 10566654 10566669 FOXP1 JASPAR yes 26718624
chr1 10566657 10566672 STAT2 JASPAR yes 26718625
Genes associated with rs2506879[chr1:10566668], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More