EnhancerDB
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  3. rs2506880[chr1:10568277]
Enhancers that have rs2506880[chr1:10568277]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 10562245 10593475 enh59
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs2506880[chr1:10568277]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 10568259 10568279 RREB1 JASPAR yes 26718833
chr1 10568259 10568280 IRF1 JASPAR yes 26718834
chr1 10568260 10568281 IRF1 JASPAR yes 26718837
chr1 10568265 10568286 IRF1 JASPAR yes 26718840
chr1 10568266 10568281 FOXP1 JASPAR yes 26718842
chr1 10568267 10568278 FOXP2 JASPAR yes 26718843
chr1 10568267 10568279 FOXC2 JASPAR yes 26718844
Genes associated with rs2506880[chr1:10568277], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More