EnhancerDB
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  3. rs2509987[chr11:62212090]
Enhancers that have rs2509987[chr11:62212090]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 62190145 62243455 enh13972
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr11 62211626 62212261 vista10494
VISTA
Transcript factors that have rs2509987[chr11:62212090]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 62211769 62212125 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21488762
chr11 62211769 62212125 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107974420
chr11 62211980 62212290 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21488763
chr11 62211980 62212290 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107974421
chr11 62212026 62212144 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21488764
chr11 62212026 62212144 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107974422
chr11 62212037 62212287 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107974423
chr11 62212088 62212103 STAT2 JASPAR yes 39201673
chr11 62212088 62212103 STAT2 JASPAR yes 114080204
Genes associated with rs2509987[chr11:62212090], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More