EnhancerDB
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  3. rs2509988[chr11:62212043]
Enhancers that have rs2509988[chr11:62212043]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 62190145 62243455 enh13972
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr11 62211626 62212261 vista10494
VISTA
Transcript factors that have rs2509988[chr11:62212043]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 62211769 62212125 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21488762
chr11 62211769 62212125 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107974420
chr11 62211980 62212290 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21488763
chr11 62211980 62212290 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107974421
chr11 62212026 62212144 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21488764
chr11 62212026 62212144 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107974422
chr11 62212037 62212047 SP1 JASPAR yes 39201665
chr11 62212037 62212047 SP1 JASPAR yes 114080196
chr11 62212037 62212287 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107974423
chr11 62212040 62212052 ZBTB7B JASPAR yes 39201666
chr11 62212040 62212052 ZBTB7B JASPAR yes 114080197
chr11 62212042 62212055 NFKB1 JASPAR yes 39201667
chr11 62212042 62212055 NFKB1 JASPAR yes 114080198
chr11 62212042 62212062 PPARG JASPAR yes 39201668
chr11 62212042 62212062 PPARG JASPAR yes 114080199
Genes associated with rs2509988[chr11:62212043], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More