EnhancerDB
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Enhancers that have rs2516091[chr1:9225184]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9220009 9228971 enh11480
Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
chr1 9224991 9225286 vista287
VISTA
Transcript factors that have rs2516091[chr1:9225184]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9224562 9226488 ZNF143 GTRD no Epithelial (MCF-7) 107802008
chr1 9224562 9226488 ZNF143 GTRD no Epithelial (MCF-7) 107802009
chr1 9225170 9225184 BATF3 JASPAR yes 26624369
chr1 9225170 9225184 BATF3 JASPAR yes 118226848
Genes associated with rs2516091[chr1:9225184], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 9352939 9429591 + SPSB1 ENSG00000171621.9 9352939 127755 Ovary 0.311143 123