EnhancerDB
  1. Home
  2. SNP
  3. rs2517580[chr6:30810056]
Enhancers that have rs2517580[chr6:30810056]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2517580[chr6:30810056]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30810051 30810072 IRF1 JASPAR yes 101058219
chr6 30810053 30810068 STAT2 JASPAR yes 101058220
chr6 30810055 30810067 IRF1 JASPAR yes 101058221
Genes associated with rs2517580[chr6:30810056], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More