EnhancerDB
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  3. rs2517581[chr6:30809664]
Enhancers that have rs2517581[chr6:30809664]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2517581[chr6:30809664]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30809651 30809665 RXRB JASPAR yes 101058155
chr6 30809651 30809665 RXRG JASPAR yes 101058156
chr6 30809651 30809666 NR2C2 JASPAR yes 101058157
chr6 30809652 30809666 PLAG1 JASPAR yes 101058158
Genes associated with rs2517581[chr6:30809664], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More