EnhancerDB
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  3. rs2517582[chr6:30808762]
Enhancers that have rs2517582[chr6:30808762]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2517582[chr6:30808762]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30808757 30808767 ID4 JASPAR yes 101058045
chr6 30808757 30808767 TCF3 JASPAR yes 101058046
chr6 30808757 30808767 TCF4 JASPAR yes 101058047
chr6 30808758 30808767 SNAI2 JASPAR yes 101058048
chr6 30808759 30808764 USF2 TRANSFAC yes 101058049
Genes associated with rs2517582[chr6:30808762], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr6 30908749 30921998 + DPCR1 ENSG00000168631.7 30908749 99987 Thyroid 0.00786191 6357