EnhancerDB
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  3. rs2517674[chr6:29935806]
Enhancers that have rs2517674[chr6:29935806]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 29930235 29938316 enh9028
Liver Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs2517674[chr6:29935806]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 29935295 29936003 GATA1 UCSC Txn Factor no Conserved 108539463
chr6 29935806 29935810 TEAD2 TRANSFAC yes 101019086
chr6 29935806 29935811 TBP TRANSFAC yes 101019087
chr6 29935806 29935812 TMF TRANSFAC yes 101019088
Genes associated with rs2517674[chr6:29935806], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr6 29909037 29913661 + HLA-A ENSG00000206503.7 29909037 22145 Heart 3.94134e-22 6326