EnhancerDB
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  3. rs2517685[chr6:29931035]
Enhancers that have rs2517685[chr6:29931035]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 29930235 29938316 enh9028
Liver Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs2517685[chr6:29931035]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 29931025 29931040 IRF9 JASPAR yes 101018300
chr6 29931027 29931041 STAT1 JASPAR yes 101018301
chr6 29931027 29931042 STAT2 JASPAR yes 101018302
Genes associated with rs2517685[chr6:29931035], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More