EnhancerDB
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  3. rs2523161[chr17:42179405]
Enhancers that have rs2523161[chr17:42179405]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42170662 42193575 enh17179
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2523161[chr17:42179405]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42179403 42179414 EBF1 JASPAR yes 54387353
chr17 42179403 42179417 PLAG1 JASPAR yes 54387354
Genes associated with rs2523161[chr17:42179405], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More