EnhancerDB
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  3. rs252361[chr16:29170842]
Enhancers that have rs252361[chr16:29170842]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29150646 29173335 enh16623
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Ovary Esophagus Astrocyte Blood (T-cell) Lung (A549) Stomach Placenta Uterus Lung (PC-9) Breast Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs252361[chr16:29170842]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29170341 29171032 ZBTB33 GTRD no Brain (SK-N-SH) 21701846
chr16 29170341 29171032 ZBTB33 GTRD no Brain (SK-N-SH) 108191379
chr16 29170400 29171022 MYOD GTRD no Muscle (Myoblast) 108191380
chr16 29170406 29171716 ZBTB33 GTRD no Brain (SK-N-SH) 21701847
chr16 29170406 29171716 ZBTB33 GTRD no Brain (SK-N-SH) 108191381
chr16 29170835 29170849 STAT1 JASPAR yes 10246715
chr16 29170837 29170858 IRF1 JASPAR yes 10246716
chr16 29170839 29170854 IRF9 JASPAR yes 10246717
chr16 29170841 29170856 STAT2 JASPAR yes 10246718
Genes associated with rs252361[chr16:29170842], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More