EnhancerDB
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  3. rs252491[chr16:29158794]
Enhancers that have rs252491[chr16:29158794]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29150646 29173335 enh16623
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Ovary Esophagus Astrocyte Blood (T-cell) Lung (A549) Stomach Placenta Uterus Lung (PC-9) Breast Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs252491[chr16:29158794]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29158011 29159503 TCF7L2 GTRD no Colon (HCT116) 108191341
chr16 29158029 29159332 TCF7L2 GTRD no Colon (HCT116) 108191342
chr16 29158539 29159180 TCF7L2 GTRD no Colon (HCT116) 108191343
chr16 29158785 29158800 MYBL2 JASPAR yes 10245071
chr16 29158792 29158804 NHLH1 JASPAR yes 10245072
chr16 29158793 29158803 MSC JASPAR yes 10245073
chr16 29158793 29158803 NHLH1 JASPAR yes 10245074
chr16 29158793 29158803 TFAP4 JASPAR yes 10245075
Genes associated with rs252491[chr16:29158794], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More