EnhancerDB
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  3. rs2525089[chr17:46063524]
Enhancers that have rs2525089[chr17:46063524]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 46058151 46084696 enh4448
Liver Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs2525089[chr17:46063524]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 46062662 46064863 AR GTRD no Prostate (PC-3) 21767277
chr17 46062845 46063619 ZBTB33 GTRD no Brain (SK-N-SH) 21767278
chr17 46062963 46063975 ZBTB33 GTRD no Brain (SK-N-SH) 21767279
chr17 46062980 46063702 ZNF143 GTRD no Epithelial (MCF-7) 21767280
chr17 46062997 46063816 ZBTB33 GTRD no Brain (SK-N-SH) 21767281
chr17 46063005 46064137 ZBTB33 GTRD no Brain (SK-N-SH) 21767282
chr17 46063011 46064018 ZBTB33 GTRD no Brain (SK-N-SH) 21767283
chr17 46063012 46063749 ZBTB33 GTRD no Brain (SK-N-SH) 21767284
chr17 46063020 46063614 ZNF143 GTRD no Epithelial (MCF-7) 21767285
chr17 46063023 46063874 ZNF274 GTRD no Cervix (HeLa-S3) 21767286
chr17 46063028 46063737 ZBTB33 GTRD no Brain (SK-N-SH) 21767287
chr17 46063041 46063638 ZBTB33 GTRD no Brain (SK-N-SH) 21767288
chr17 46063043 46063847 ZNF274 GTRD no Cervix (HeLa-S3) 21767289
chr17 46063057 46063748 ZNF143 GTRD no Epithelial (MCF-7) 21767290
chr17 46063076 46063806 ZBTB33 GTRD no Brain (SK-N-SH) 21767291
chr17 46063081 46063703 ZNF274 GTRD no Cervix (HeLa-S3) 21767292
chr17 46063082 46063708 ZBTB33 GTRD no Brain (SK-N-SH) 21767293
chr17 46063107 46063847 ZBTB33 GTRD no Brain (SK-N-SH) 21767294
chr17 46063114 46063659 ZNF143 GTRD no Epithelial (MCF-7) 21767295
chr17 46063118 46063729 ZNF274 GTRD no Cervix (HeLa-S3) 21767296
chr17 46063119 46063679 ZBTB33 GTRD no Brain (SK-N-SH) 21767297
chr17 46063134 46063729 ZBTB33 GTRD no Brain (SK-N-SH) 21767298
chr17 46063144 46063692 ZNF143 GTRD no Epithelial (MCF-7) 21767299
chr17 46063148 46063733 ZNF143 GTRD no Epithelial (MCF-7) 21767300
chr17 46063152 46063779 ZNF274 GTRD no Cervix (HeLa-S3) 21767301
chr17 46063181 46063676 ZNF143 GTRD no Epithelial (MCF-7) 21767302
chr17 46063191 46063682 ZBTB33 GTRD no Brain (SK-N-SH) 21767303
chr17 46063195 46063722 ZNF274 GTRD no Cervix (HeLa-S3) 21767304
chr17 46063199 46063690 ZBTB33 GTRD no Brain (SK-N-SH) 21767305
chr17 46063200 46063653 ZNF143 GTRD no Epithelial (MCF-7) 21767306
chr17 46063215 46063620 ZNF143 GTRD no Epithelial (MCF-7) 21767307
chr17 46063265 46063648 ZNF274 GTRD no Cervix (HeLa-S3) 21767308
chr17 46063289 46063709 ZNF143 GTRD no Epithelial (MCF-7) 21767309
chr17 46063294 46063594 ZNF274 GTRD no Cervix (HeLa-S3) 21767310
chr17 46063298 46063710 ZNF143 GTRD no Epithelial (MCF-7) 21767311
chr17 46063520 46063530 ID4 JASPAR yes 54549016
chr17 46063520 46063530 TCF3 JASPAR yes 54549017
chr17 46063520 46063530 TCF4 JASPAR yes 54549018
chr17 46063521 46063530 SNAI2 JASPAR yes 54549019
chr17 46063522 46063527 USF2 TRANSFAC yes 54549020
Genes associated with rs2525089[chr17:46063524], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More