EnhancerDB
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  3. rs2535338[chr6:30804932]
Enhancers that have rs2535338[chr6:30804932]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2535338[chr6:30804932]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30804929 30804939 NEUROD2 JASPAR yes 101057340
chr6 30804929 30804940 USF1 JASPAR yes 101057341
chr6 30804929 30804940 USF2 JASPAR yes 101057342
chr6 30804929 30804947 TP73 JASPAR yes 101057343
chr6 30804930 30804940 MAX JASPAR yes 101057344
Genes associated with rs2535338[chr6:30804932], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More