EnhancerDB
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  3. rs2546[chr1:16113037]
Enhancers that have rs2546[chr1:16113037]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16111145 16132915 enh11541
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs2546[chr1:16113037]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16113026 16113044 IRF2 JASPAR yes 27000720
chr1 16113028 16113038 HMBOX1 JASPAR yes 27000721
chr1 16113029 16113044 STAT2 JASPAR yes 27000722
chr1 16113030 16113044 STAT1 JASPAR yes 27000723
Genes associated with rs2546[chr1:16113037], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More