EnhancerDB
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  3. rs2546363[chr5:159597288]
Enhancers that have rs2546363[chr5:159597288]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 159580425 159605208 enh22765
Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2546363[chr5:159597288]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 159597278 159597291 POU3F3 JASPAR yes 67345974
chr5 159597278 159597292 POU1F1 JASPAR yes 67345975
chr5 159597280 159597291 PROP1 JASPAR yes 67345976
chr5 159597283 159597293 ALX3 JASPAR yes 67345977
chr5 159597283 159597293 EMX1 JASPAR yes 67345978
chr5 159597283 159597293 EMX2 JASPAR yes 67345979
chr5 159597283 159597293 ESX1 JASPAR yes 67345980
chr5 159597283 159597293 GSX1 JASPAR yes 67345981
chr5 159597283 159597293 GSX2 JASPAR yes 67345982
chr5 159597283 159597293 HESX1 JASPAR yes 67345983
chr5 159597283 159597293 HOXA2 JASPAR yes 67345984
chr5 159597283 159597293 HOXB2 JASPAR yes 67345985
chr5 159597283 159597293 HOXB3 JASPAR yes 67345986
chr5 159597283 159597293 LBX2 JASPAR yes 67345987
chr5 159597283 159597293 LHX2 JASPAR yes 67345988
chr5 159597283 159597293 LHX6 JASPAR yes 67345989
chr5 159597283 159597293 MEOX1 JASPAR yes 67345990
chr5 159597283 159597293 MEOX2 JASPAR yes 67345991
chr5 159597283 159597293 MIXL1 JASPAR yes 67345992
chr5 159597283 159597293 MNX1 JASPAR yes 67345993
chr5 159597283 159597293 NOTO JASPAR yes 67345994
chr5 159597283 159597293 RAX JASPAR yes 67345995
chr5 159597284 159597292 BSX JASPAR yes 67345996
chr5 159597284 159597292 DLX6 JASPAR yes 67345997
chr5 159597284 159597292 EN1 JASPAR yes 67345998
chr5 159597284 159597292 ISX JASPAR yes 67345999
chr5 159597284 159597292 LBX1 JASPAR yes 67346000
chr5 159597284 159597292 LHX9 JASPAR yes 67346001
chr5 159597284 159597292 LMX1A JASPAR yes 67346002
chr5 159597284 159597292 LMX1B JASPAR yes 67346003
chr5 159597284 159597292 NKX6-1 JASPAR yes 67346004
chr5 159597284 159597292 NKX6-2 JASPAR yes 67346005
chr5 159597284 159597292 PAX4 JASPAR yes 67346006
chr5 159597284 159597292 PDX1 JASPAR yes 67346007
chr5 159597284 159597292 PRRX1 JASPAR yes 67346008
chr5 159597284 159597292 RAX2 JASPAR yes 67346009
chr5 159597284 159597292 SHOX JASPAR yes 67346010
chr5 159597284 159597292 UNCX JASPAR yes 67346011
chr5 159597284 159597292 VAX1 JASPAR yes 67346012
chr5 159597284 159597292 VAX2 JASPAR yes 67346013
chr5 159597284 159597292 VSX1 JASPAR yes 67346014
chr5 159597284 159597292 VSX2 JASPAR yes 67346015
chr5 159597287 159597298 ESRRB JASPAR yes 67346016
Genes associated with rs2546363[chr5:159597288], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More