EnhancerDB
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  3. rs2546371[chr5:159592857]
Enhancers that have rs2546371[chr5:159592857]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 159580425 159605208 enh22765
Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr5 159592617 159593055 vista49912
VISTA
Transcript factors that have rs2546371[chr5:159592857]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 159591962 159593679 POLR2A UCSC Txn Factor no Conserved 108537258
chr5 159591962 159593679 POLR2A UCSC Txn Factor no Conserved 108537259
chr5 159592590 159592951 MYC UCSC Txn Factor no Conserved 108537260
chr5 159592626 159593010 USF1 UCSC Txn Factor no Conserved 108537261
chr5 159592686 159592979 USF2 UCSC Txn Factor no Conserved 108537262
chr5 159592732 159593017 NFYA UCSC Txn Factor no Conserved 108537263
chr5 159592750 159593018 NFYB UCSC Txn Factor no Conserved 108537264
chr5 159592754 159593198 GATA2 UCSC Txn Factor no Conserved 108537265
chr5 159592840 159592858 NFYA JASPAR yes 67345256
chr5 159592840 159592858 NFYA JASPAR yes 70751411
chr5 159592847 159592858 NRL JASPAR yes 67345261
chr5 159592847 159592858 NRL JASPAR yes 70751416
chr5 159592854 159592868 SPI1 JASPAR yes 67345262
chr5 159592854 159592868 SPI1 JASPAR yes 70751417
Genes associated with rs2546371[chr5:159592857], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More