EnhancerDB
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  3. rs2546754[chr5:173204183]
Enhancers that have rs2546754[chr5:173204183]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 173178093 173268555 enh8886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2546754[chr5:173204183]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 173204173 173204183 MAX JASPAR yes 67903696
chr5 173204173 173204184 USF2 JASPAR yes 67903697
chr5 173204174 173204184 TFE3 JASPAR yes 67903698
chr5 173204174 173204184 TFEB JASPAR yes 67903699
chr5 173204174 173204184 TFEC JASPAR yes 67903700
chr5 173204181 173204202 MAFG JASPAR yes 67903701
Genes associated with rs2546754[chr5:173204183], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More