EnhancerDB
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  3. rs2546758[chr5:173203214]
Enhancers that have rs2546758[chr5:173203214]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 173178093 173268555 enh8886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2546758[chr5:173203214]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 173203209 173203224 PRDM1 JASPAR yes 67903556
chr5 173203213 173203218 MYB TRANSFAC yes 67903557
chr5 173203214 173203228 IRF8 JASPAR yes 67903558
Genes associated with rs2546758[chr5:173203214], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More