EnhancerDB
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  3. rs2546761[chr5:173200172]
Enhancers that have rs2546761[chr5:173200172]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 173178093 173268555 enh8886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2546761[chr5:173200172]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 173200165 173200176 FOXB1 JASPAR yes 67903119
chr5 173200166 173200174 FOXL1 JASPAR yes 67903120
chr5 173200166 173200177 FOXB1 JASPAR yes 67903121
chr5 173200167 173200178 FOXB1 JASPAR yes 67903122
chr5 173200168 173200176 FOXL1 JASPAR yes 67903123
chr5 173200168 173200179 FOXB1 JASPAR yes 67903124
chr5 173200170 173200178 FOXL1 JASPAR yes 67903125
chr5 173200172 173200187 MEF2A JASPAR yes 67903126
Genes associated with rs2546761[chr5:173200172], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More