EnhancerDB
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  3. rs2546983[chr5:159591566]
Enhancers that have rs2546983[chr5:159591566]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 159580425 159605208 enh22765
Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2546983[chr5:159591566]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 159591547 159591568 IRF1 JASPAR yes 67345100
chr5 159591550 159591571 IRF1 JASPAR yes 67345101
chr5 159591552 159591567 FOXP1 JASPAR yes 67345102
chr5 159591553 159591568 FOXP1 JASPAR yes 67345103
chr5 159591554 159591569 FOXP1 JASPAR yes 67345104
chr5 159591554 159591575 IRF1 JASPAR yes 67345105
chr5 159591555 159591570 FOXP1 JASPAR yes 67345106
chr5 159591555 159591576 IRF1 JASPAR yes 67345107
chr5 159591556 159591571 FOXP1 JASPAR yes 67345108
chr5 159591561 159591576 FOXP1 JASPAR yes 67345109
Genes associated with rs2546983[chr5:159591566], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More