EnhancerDB
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  3. rs2561759[chr5:173203737]
Enhancers that have rs2561759[chr5:173203737]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 173178093 173268555 enh8886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2561759[chr5:173203737]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 173203731 173203746 NR2C2 JASPAR yes 67903616
chr5 173203735 173203750 TFAP2A JASPAR yes 67903617
chr5 173203735 173203750 TFAP2C JASPAR yes 67903618
Genes associated with rs2561759[chr5:173203737], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More