EnhancerDB
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  3. rs2568130[chr11:20042153]
Enhancers that have rs2568130[chr11:20042153]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 20020085 20069135 enh13838
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Liver Bone (Osteoblast) Lung (PC-9) Stomach Placenta Thyroid Uterus Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs2568130[chr11:20042153]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 20041229 20042982 ZNF143 GTRD no Epithelial (MCF-7) 21473804
chr11 20041229 20042982 ZNF143 GTRD no Epithelial (MCF-7) 107961519
chr11 20041321 20042793 ZBTB33 GTRD no Lung (A549) 107961520
chr11 20041417 20042859 ZBTB33 GTRD no Lung (A549) 107961521
chr11 20041429 20042805 ZBTB33 GTRD no Lung (A549) 107961522
chr11 20041450 20042667 ZBTB33 GTRD no Lung (A549) 107961524
chr11 20041584 20042839 ZNF143 GTRD no Epithelial (MCF-7) 21473805
chr11 20041584 20042839 ZNF143 GTRD no Epithelial (MCF-7) 107961527
chr11 20041607 20042826 ZNF143 GTRD no Epithelial (MCF-7) 21473806
chr11 20041607 20042826 ZNF143 GTRD no Epithelial (MCF-7) 107961528
chr11 20041628 20042766 ZNF143 GTRD no Epithelial (MCF-7) 21473807
chr11 20041628 20042766 ZNF143 GTRD no Epithelial (MCF-7) 107961530
chr11 20041645 20042768 ZNF143 GTRD no Epithelial (MCF-7) 21473808
chr11 20041645 20042768 ZNF143 GTRD no Epithelial (MCF-7) 107961532
chr11 20041657 20042794 ZNF143 GTRD no Epithelial (MCF-7) 21473809
chr11 20041657 20042794 ZNF143 GTRD no Epithelial (MCF-7) 107961533
chr11 20041672 20042823 ZNF143 GTRD no Epithelial (MCF-7) 21473810
chr11 20041672 20042823 ZNF143 GTRD no Epithelial (MCF-7) 107961534
chr11 20041687 20042887 ZNF143 GTRD no Epithelial (MCF-7) 21473811
chr11 20041687 20042887 ZNF143 GTRD no Epithelial (MCF-7) 107961535
chr11 20041694 20042746 ZNF143 GTRD no Epithelial (MCF-7) 21473812
chr11 20041694 20042746 ZNF143 GTRD no Epithelial (MCF-7) 107961536
chr11 20041791 20042624 ZNF143 GTRD no Epithelial (MCF-7) 21473816
chr11 20041791 20042624 ZNF143 GTRD no Epithelial (MCF-7) 107961540
chr11 20042146 20042157 RUNX1 JASPAR yes 37827172
chr11 20042152 20042167 STAT2 JASPAR yes 37827173
Genes associated with rs2568130[chr11:20042153], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More