EnhancerDB
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  3. rs2582652[chr1:234887688]
Enhancers that have rs2582652[chr1:234887688]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234877045 234913055 enh12796
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs2582652[chr1:234887688]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234887465 234887941 ZNF274 GTRD no Bone Marrow (K562) 21397565
chr1 234887685 234887693 FOXL1 JASPAR yes 36311277
chr1 234887686 234887699 SMAD2 JASPAR yes 36311278
Genes associated with rs2582652[chr1:234887688], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 235272651 235292251 - TOMM20 ENSG00000173726.6 235292251 384963 Esophagus 0.228955 1965