EnhancerDB
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  3. rs2586088[chr17:56013715]
Enhancers that have rs2586088[chr17:56013715]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2586088[chr17:56013715]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56013448 56013808 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21773900
chr17 56013448 56013808 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108274798
chr17 56013666 56013942 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21773902
chr17 56013666 56013942 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108274800
chr17 56013669 56013925 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108274801
chr17 56013683 56013907 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21773903
chr17 56013683 56013907 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108274802
chr17 56013707 56013723 SOX4 JASPAR yes 55001754
chr17 56013713 56013717 H1TF2 TRANSFAC yes 55001755
chr17 56013713 56013717 NFE TRANSFAC yes 55001756
chr17 56013713 56013717 SRF TRANSFAC yes 55001757
Genes associated with rs2586088[chr17:56013715], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More