EnhancerDB
  1. Home
  2. SNP
  3. rs2586232[chr17:55550834]
Enhancers that have rs2586232[chr17:55550834]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55530146 55569915 enh4488
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs2586232[chr17:55550834]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55550828 55550849 IRF1 JASPAR yes 54958762
chr17 55550829 55550850 IRF1 JASPAR yes 54958763
chr17 55550833 55550839 HiNF-A TRANSFAC yes 54958764
chr17 55550833 55550845 IRF1 JASPAR yes 54958765
chr17 55550833 55550848 STAT2 JASPAR yes 54958766
chr17 55550834 55550849 FOXP1 JASPAR yes 54958767
Genes associated with rs2586232[chr17:55550834], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More