EnhancerDB
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  3. rs2587534[chr1:234849339]
Enhancers that have rs2587534[chr1:234849339]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234827105 234875936 enh12795
Bone Marrow (K562) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2587534[chr1:234849339]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234846140 234850353 ZNF274 GTRD no Bone Marrow (K562) 21396143
chr1 234848192 234850267 ZNF274 GTRD no Blood (GM12878) 21396152
chr1 234848596 234849535 ZNF274 GTRD no Bone Marrow (K562) 21396153
chr1 234848605 234849553 ZNF274 GTRD no Cervix (HeLa-S3) 21396154
chr1 234848631 234850208 ZNF274 GTRD no Bone Marrow (K562) 21396155
chr1 234848654 234850176 ZNF274 GTRD no Bone Marrow (K562) 21396156
chr1 234848669 234850115 ZNF274 GTRD no Bone Marrow (K562) 21396157
chr1 234848716 234849930 ZNF274 GTRD no Bone Marrow (K562) 21396159
chr1 234848746 234850269 ZNF274 GTRD no Bone Marrow (K562) 21396161
chr1 234848753 234849359 ZNF274 GTRD no Bone Marrow (K562) 21396162
chr1 234848845 234850236 ZNF274 GTRD no Blood (GM12878) 21396168
chr1 234848850 234849368 ZNF143 GTRD no Epithelial (MCF-7) 21396169
chr1 234848857 234849732 ZNF274 GTRD no Bone Marrow (K562) 21396170
chr1 234848871 234850315 ZNF274 GTRD no Blood (GM12878) 21396171
chr1 234848923 234849621 ZNF274 GTRD no Bone Marrow (K562) 21396179
chr1 234848925 234849529 ZNF274 GTRD no Bone Marrow (K562) 21396181
chr1 234848942 234849708 ZNF274 GTRD no Bone Marrow (K562) 21396183
chr1 234849011 234849553 ZNF274 GTRD no Bone Marrow (K562) 21396186
chr1 234849027 234850354 ZNF274 GTRD no Blood (GM12878) 21396187
chr1 234849087 234849605 ZNF274 GTRD no Bone Marrow (K562) 21396188
chr1 234849102 234849686 ZNF143 GTRD no Epithelial (MCF-7) 21396189
chr1 234849166 234849611 ZNF143 GTRD no Epithelial (MCF-7) 21396190
chr1 234849189 234849632 ZNF274 GTRD no Bone Marrow (K562) 21396191
chr1 234849191 234849632 ZNF274 GTRD no Bone Marrow (K562) 21396192
chr1 234849205 234849617 ZNF143 GTRD no Epithelial (MCF-7) 21396193
chr1 234849304 234849846 ZBTB33 GTRD no Brain (SK-N-SH) 21396194
chr1 234849305 234850003 ZBTB33 GTRD no Brain (SK-N-SH) 21396195
chr1 234849317 234849763 ZBTB33 GTRD no Brain (SK-N-SH) 21396196
chr1 234849324 234849342 RARA JASPAR yes 36306130
chr1 234849325 234849345 ESR1 JASPAR yes 36306131
Genes associated with rs2587534[chr1:234849339], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More