EnhancerDB
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  3. rs2594836[chr5:173205318]
Enhancers that have rs2594836[chr5:173205318]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 173178093 173268555 enh8886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2594836[chr5:173205318]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 173205307 173205319 YY1 JASPAR yes 67903864
chr5 173205307 173205319 YY1 JASPAR yes 70766810
chr5 173205309 173205320 YY2 JASPAR yes 67903865
chr5 173205314 173205332 RARA JASPAR yes 67903866
Genes associated with rs2594836[chr5:173205318], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More