EnhancerDB
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  3. rs2594880[chr5:173190755]
Enhancers that have rs2594880[chr5:173190755]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 173178093 173268555 enh8886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2594880[chr5:173190755]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 173190740 173190758 RARA JASPAR yes 67901890
chr5 173190748 173190756 NR4A2 JASPAR yes 67901891
chr5 173190753 173190767 SPI1 JASPAR yes 67901893
chr5 173190753 173190767 SPIC JASPAR yes 67901894
Genes associated with rs2594880[chr5:173190755], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More