EnhancerDB
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  3. rs260875[chr5:173262278]
Enhancers that have rs260875[chr5:173262278]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 173178093 173268555 enh8886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr5 173262219 173262354 vista50239
VISTA
Transcript factors that have rs260875[chr5:173262278]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 173262262 173262283 ZNF263 JASPAR yes 67912390
chr5 173262262 173262283 ZNF263 JASPAR yes 70767123
chr5 173262265 173262286 ZNF263 JASPAR yes 67912391
chr5 173262265 173262286 ZNF263 JASPAR yes 70767124
chr5 173262270 173262285 STAT1 JASPAR yes 67912392
chr5 173262270 173262285 STAT1 JASPAR yes 70767125
chr5 173262272 173262283 STAT1 JASPAR yes 67912393
chr5 173262272 173262283 STAT3 JASPAR yes 67912394
chr5 173262272 173262283 STAT1 JASPAR yes 70767126
chr5 173262272 173262283 STAT3 JASPAR yes 70767127
chr5 173262275 173262282 ETS1 TRANSFAC yes 67912395
chr5 173262275 173262282 ETS1 TRANSFAC yes 70767128
chr5 173262276 173262284 EHF JASPAR yes 67912396
chr5 173262276 173262284 EHF JASPAR yes 70767129
chr5 173262277 173262291 STAT1 JASPAR yes 67912397
chr5 173262277 173262291 STAT1 JASPAR yes 70767130
Genes associated with rs260875[chr5:173262278], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More