EnhancerDB
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  3. rs2617867[chr17:28049399]
Enhancers that have rs2617867[chr17:28049399]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 28029886 28064015 enh4330
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs2617867[chr17:28049399]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 28049201 28049751 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21749552
chr17 28049201 28049751 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108248021
chr17 28049369 28049719 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21749553
chr17 28049369 28049719 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108248022
chr17 28049376 28049632 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21749554
chr17 28049376 28049632 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108248023
chr17 28049385 28049749 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21749555
chr17 28049385 28049749 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108248024
chr17 28049387 28049401 TLX1 JASPAR yes 53753542
Genes associated with rs2617867[chr17:28049399], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More