EnhancerDB
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  3. rs2628191[chr17:28051140]
Enhancers that have rs2628191[chr17:28051140]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 28029886 28064015 enh4330
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs2628191[chr17:28051140]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 28050552 28051148 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21749591
chr17 28050552 28051148 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108248063
chr17 28050688 28051144 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21749598
chr17 28050688 28051144 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108248071
chr17 28051133 28051146 DUXA JASPAR yes 53753765
chr17 28051134 28051145 DUX4 JASPAR yes 53753766
chr17 28051134 28051145 PHOX2A JASPAR yes 53753767
chr17 28051134 28051145 PROP1 JASPAR yes 53753768
Genes associated with rs2628191[chr17:28051140], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More