EnhancerDB
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  3. rs2663334[chr17:879790]
Enhancers that have rs2663334[chr17:879790]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 845785 881195 enh32038
Astrocyte Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs2663334[chr17:879790]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 879775 879790 MEF2A JASPAR yes 52648256
chr17 879776 879791 MEF2C JASPAR yes 52648257
chr17 879778 879792 GATA2 JASPAR yes 52648262
chr17 879790 879804 TLX1 JASPAR yes 52648264
Genes associated with rs2663334[chr17:879790], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More