EnhancerDB
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  3. rs2665213[chr15:42234265]
Enhancers that have rs2665213[chr15:42234265]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42202285 42235244 enh3549
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2665213[chr15:42234265]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42234262 42234268 LEF1 TRANSFAC yes 23008220
chr15 42234262 42234268 SOX10 JASPAR yes 23008221
chr15 42234265 42234280 HNF4A JASPAR yes 23008222
Genes associated with rs2665213[chr15:42234265], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More