EnhancerDB
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  3. rs2682728[chr12:65076498]
Enhancers that have rs2682728[chr12:65076498]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65039765 65087550 enh2405
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr12 65076423 65076649 vista13806
VISTA
Transcript factors that have rs2682728[chr12:65076498]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65076096 65076577 ZNF274 GTRD no Liver (HepG2) 21552917
chr12 65076096 65076577 ZNF274 GTRD no Liver (HepG2) 108041936
chr12 65076321 65076765 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21552918
chr12 65076321 65076765 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108041937
chr12 65076489 65076504 ZIC3 JASPAR yes 82422857
chr12 65076489 65076504 ZIC3 JASPAR yes 121425978
chr12 65076492 65076638 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21552919
chr12 65076492 65076638 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 108041938
Genes associated with rs2682728[chr12:65076498], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More