EnhancerDB
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  3. rs271744[chr1:234623253]
Enhancers that have rs271744[chr1:234623253]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234620765 234647895 enh990
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs271744[chr1:234623253]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234623093 234624907 ZNF274 GTRD no Liver (HepG2) 21393157
chr1 234623093 234624907 ZNF274 GTRD no Liver (HepG2) 107879966
chr1 234623202 234623810 ZNF274 GTRD no Liver (HepG2) 21393158
chr1 234623244 234623255 E2F6 JASPAR yes 36277640
chr1 234623253 234623261 MEIS2 JASPAR yes 36277641
chr1 234623253 234623261 MEIS3 JASPAR yes 36277642
Genes associated with rs271744[chr1:234623253], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 234527059 234614849 - TARBP1 ENSG00000059588.5 234614849 8404 Spleen 0.245779 1963