EnhancerDB
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  3. rs271752[chr1:234628018]
Enhancers that have rs271752[chr1:234628018]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234620765 234647895 enh990
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs271752[chr1:234628018]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234626231 234628484 TEF1 GTRD no Bone (Osteoblast) 21393225
chr1 234627153 234628217 ZNF274 GTRD no Liver (HepG2) 21393252
chr1 234627301 234628165 ZNF274 GTRD no Liver (HepG2) 21393255
chr1 234627409 234628168 ZNF274 GTRD no Liver (HepG2) 21393258
chr1 234627422 234628351 ZNF274 GTRD no Liver (HepG2) 21393259
chr1 234627424 234628124 ZNF274 GTRD no Liver (HepG2) 21393260
chr1 234627483 234628023 ZNF274 GTRD no Liver (HepG2) 21393263
chr1 234627487 234628072 ZNF274 GTRD no Bone Marrow (K562) 21393264
chr1 234627537 234628020 ZNF274 GTRD no Liver (HepG2) 21393268
chr1 234627573 234628666 ZBTB33 GTRD no Brain (SK-N-SH) 21393270
chr1 234627624 234628613 ZBTB33 GTRD no Brain (SK-N-SH) 21393273
chr1 234627646 234628028 ZNF274 GTRD no Liver (HepG2) 21393274
chr1 234627864 234628702 ZBTB33 GTRD no Brain (SK-N-SH) 21393275
chr1 234627917 234628499 ZBTB33 GTRD no Brain (SK-N-SH) 21393276
chr1 234627926 234628761 ZNF143 GTRD no Epithelial (MCF-7) 21393277
chr1 234627939 234628498 ZBTB33 GTRD no Brain (SK-N-SH) 21393278
chr1 234627948 234628514 ZNF143 GTRD no Epithelial (MCF-7) 21393279
chr1 234627953 234628571 ZBTB33 GTRD no Brain (SK-N-SH) 21393280
chr1 234627986 234628606 ZBTB33 GTRD no Brain (SK-N-SH) 21393281
chr1 234627995 234628628 ZBTB33 GTRD no Brain (SK-N-SH) 21393282
chr1 234628000 234628647 ZBTB33 GTRD no Brain (SK-N-SH) 21393283
chr1 234628017 234628551 ZNF143 GTRD no Epithelial (MCF-7) 21393284
Genes associated with rs271752[chr1:234628018], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More