EnhancerDB
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  3. rs271753[chr1:234628997]
Enhancers that have rs271753[chr1:234628997]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234620765 234647895 enh990
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs271753[chr1:234628997]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234628189 234629899 ZNF274 GTRD no Blood (GM12878) 21393295
chr1 234628825 234629608 TEF1 GTRD no Bone (Osteoblast) 21393297
chr1 234628899 234629486 ZNF274 GTRD no Cervix (HeLa-S3) 21393298
chr1 234628912 234629580 ZNF274 GTRD no Blood (GM12878) 21393299
chr1 234628936 234629588 ZNF274 GTRD no Blood (GM12878) 21393300
chr1 234628946 234629465 ZNF274 GTRD no Blood (GM12878) 21393301
chr1 234628946 234629539 ZNF274 GTRD no Blood (GM12878) 21393302
chr1 234628964 234629413 ZNF143 GTRD no Epithelial (MCF-7) 21393303
chr1 234628994 234629006 CREB1 JASPAR yes 36278393
chr1 234628995 234629000 ATF1 TRANSFAC yes 36278394
chr1 234628997 234629008 NRL JASPAR yes 36278395
Genes associated with rs271753[chr1:234628997], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More