EnhancerDB
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  3. rs2744300[chr6:25319234]
Enhancers that have rs2744300[chr6:25319234]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 25307668 25322997 enh38930
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Lung Stomach Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Uterus Muscle (Myoblast) Breast Neural Stem Cells (H9) Heart
Transcript factors that have rs2744300[chr6:25319234]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25319225 25319238 ELF3 JASPAR yes 100845325
chr6 25319226 25319236 GABPA JASPAR yes 100845326
chr6 25319226 25319237 ELF5 JASPAR yes 100845327
chr6 25319226 25319238 EHF JASPAR yes 100845328
chr6 25319226 25319238 ELF1 JASPAR yes 100845329
chr6 25319228 25319234 ETS1 JASPAR yes 100845330
chr6 25319228 25319234 SPI1 JASPAR yes 100845331
Genes associated with rs2744300[chr6:25319234], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr6 25279306 25620758 + LRRC16A ENSG00000079691.15 25279306 0 Stomach 0.000179515 6211