EnhancerDB
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  3. rs27496[chr5:14152469]
Enhancers that have rs27496[chr5:14152469]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 14142745 14193315 enh22052
Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs27496[chr5:14152469]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 14152453 14152474 IRF1 JASPAR yes 61015537
chr5 14152457 14152471 IRF7 JASPAR yes 61015539
chr5 14152457 14152472 IRF9 JASPAR yes 61015540
chr5 14152459 14152480 IRF1 JASPAR yes 61015541
chr5 14152461 14152481 RREB1 JASPAR yes 61015542
chr5 14152464 14152484 RREB1 JASPAR yes 61015543
chr5 14152465 14152485 RREB1 JASPAR yes 61015544
chr5 14152468 14152474 TCF4 TRANSFAC yes 61015545
chr5 14152468 14152480 FOXI1 JASPAR yes 61015546
chr5 14152468 14152483 FOXP1 JASPAR yes 61015547
chr5 14152468 14152488 RREB1 JASPAR yes 61015548
chr5 14152469 14152489 RREB1 JASPAR yes 61015549
Genes associated with rs27496[chr5:14152469], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More