EnhancerDB
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Enhancers that have rs275190[chr15:39419538]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 39405340 39429015 enh31301
Astrocyte Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs275190[chr15:39419538]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 39419173 39419732 ZNF143 GTRD no Epithelial (MCF-7) 21647949
chr15 39419186 39419788 ZNF143 GTRD no Epithelial (MCF-7) 21647950
chr15 39419246 39419590 ZNF143 GTRD no Epithelial (MCF-7) 21647951
chr15 39419301 39419682 ZNF143 GTRD no Epithelial (MCF-7) 21647952
chr15 39419538 39419548 NFKB1 JASPAR yes 22855546
Genes associated with rs275190[chr15:39419538], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More