EnhancerDB
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  3. rs2754273[chr6:88433865]
Enhancers that have rs2754273[chr6:88433865]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 88422133 88444375 enh23401
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs2754273[chr6:88433865]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 88433855 88433870 SCRT1 JASPAR yes 103325127
chr6 88433857 88433870 SCRT2 JASPAR yes 103325128
chr6 88433862 88433873 FOXH1 JASPAR yes 103325129
Genes associated with rs2754273[chr6:88433865], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More