EnhancerDB
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  3. rs2754276[chr6:88438678]
Enhancers that have rs2754276[chr6:88438678]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 88422133 88444375 enh23401
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs2754276[chr6:88438678]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 88438659 88438680 IRF1 JASPAR yes 103325861
chr6 88438663 88438678 STAT2 JASPAR yes 103325863
chr6 88438663 88438681 IRF2 JASPAR yes 103325864
Genes associated with rs2754276[chr6:88438678], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More