EnhancerDB
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  3. rs277073[chr17:55560636]
Enhancers that have rs277073[chr17:55560636]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55530146 55569915 enh4488
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs277073[chr17:55560636]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55560626 55560641 FOXP1 JASPAR yes 54960074
chr17 55560627 55560642 FOXP1 JASPAR yes 54960075
chr17 55560627 55560648 IRF1 JASPAR yes 54960076
chr17 55560628 55560643 FOXP1 JASPAR yes 54960078
chr17 55560630 55560645 FOXP1 JASPAR yes 54960079
chr17 55560631 55560652 IRF1 JASPAR yes 54960080
chr17 55560632 55560647 FOXP1 JASPAR yes 54960081
chr17 55560632 55560653 IRF1 JASPAR yes 54960082
Genes associated with rs277073[chr17:55560636], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More