EnhancerDB
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  3. rs2787941[chr6:88438272]
Enhancers that have rs2787941[chr6:88438272]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 88422133 88444375 enh23401
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs2787941[chr6:88438272]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 88438255 88438276 IRF1 JASPAR yes 103325809
chr6 88438257 88438272 STAT2 JASPAR yes 103325811
chr6 88438260 88438275 FOXP1 JASPAR yes 103325812
chr6 88438272 88438282 NFATC3 JASPAR yes 103325813
Genes associated with rs2787941[chr6:88438272], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More